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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928995.1_cds_XP_016476402.1_68235
CDS Infomation

[gene=LOC107797993] [db_xref=GeneID:107797993] [protein=pentatricopeptide repeat-containing protein At5g09450, mitochondrial-like] [protein_id=XP_016476402.1] [location=complement(join(3115..4014,6118..6391,6500..6534))] [gbkey=CDS]
Sequence

ATGGCTGGTCGCTCCATTTTCGCCACTCTCACAAGAAAAGCTGGTGGCAGAGAAAGGAGT
CTATTCAGATCTTTTAGTTCAACAACTGAAGTTGTCTATGAAGACCCCTCCTCTAACTGT
GCGGAGGAAGAAAATGGTGAAACGGGAGATGATTTAAAGAGCAGAATATTCAGTCTTAGA
TTACCCAAAAGAAGCGCCACCAACGTCCTTCAGAAATGGGTCACTGACGGCCGACAAGTC
TCCATCTCTGACCTCCGTCACATCTCCAAACAACTCCGCAACTCACGCAGATTCAAGCAC
GCCCTCGAGATCTCAGAATGGCTGGTTTACCACAATCAGGATGAAGCATTGGACTCCGAC
TATGCCACCCGCATTGACTTGATGACCAAAGTTTTTGGAATTGATTCTGCTGAACGCTAT
TTTGAAGGACTTCCTACCACTGTAAAAACTACTGAAACATATACTGCTCTCCTCCACTCC
TATGCTAGTTTGAGATTAACTGACAAAGCTGAGGACCTGTTTGAAAGAATGAAAGAAGCA
AATCTTTCTCTGAGCACTATCACTTATAATGAGATGATGACTTTGTACATGTCTGTTGGA
CAGCTAGAGAAAGTACCTCTTACTGTTGAGGAGATGAAACTTCAAAAGGTTGCACCAGAC
CTATTTACTTATAATCTGTGGGTAAGTTCATGTGCTGCAGCTCTAAACATTGATGAGGTG
AGACGGATTCTTGATGAAATAAGTCTTGGCTCTGACTCTGGTGAACATTGGTTAAGATAT
ATGAATCTTGTTAAAATATATATCACCTCAGGTAACCTTGTAAACTCAGGATCGAACTCT
GTAGTTGAATCTGAGAACGGTATCACACAAAGAGAGTGGATATCATATGACTTTCTTATT
ATTCTCTATGGTGCATTGGGAAATAAAGACAAGCTTGATCAAATTTGGAAATCCTTACGG
ATGACTAATCAAAAAATGACTTGCAGAAATTATGTTTGCATACTCTCATCATATCTCATG
CTTGGACATATGAAGGAAGTTGGAGAAATTATTGATCAGTGGAAGCAATCTGCTGCGACA
GATTTTGATAGCTCCAGCTGCAATAGATTTCTAAAGGCTTATAGCGAAGTTGGGTTGGAA
GAGAGAGCTGCAGCTTTCCAATTGCTTCTAATTCAGAAAGGCTGTGACCTTATAGATGAA
TCACAGTAG

Peptide Sequence

PEP ID

XP_016476402.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial-like [Nicotiana tabacum]
Sequence

MAGRSIFATLTRKAGGRERSLFRSFSSTTEVVYEDPSSNCAEEENGETGDDLKSRIFSLR
LPKRSATNVLQKWVTDGRQVSISDLRHISKQLRNSRRFKHALEISEWLVYHNQDEALDSD
YATRIDLMTKVFGIDSAERYFEGLPTTVKTTETYTALLHSYASLRLTDKAEDLFERMKEA
NLSLSTITYNEMMTLYMSVGQLEKVPLTVEEMKLQKVAPDLFTYNLWVSSCAAALNIDEV
RRILDEISLGSDSGEHWLRYMNLVKIYITSGNLVNSGSNSVVESENGITQREWISYDFLI
ILYGALGNKDKLDQIWKSLRMTNQKMTCRNYVCILSSYLMLGHMKEVGEIIDQWKQSAAT
DFDSSSCNRFLKAYSEVGLEERAAAFQLLLIQKGCDLIDESQ

Transcript Sequence

Gene sequence data has not been registered.